Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.4■■□□□ 1.02
HMG20BQ9P0W2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMG20BQ9P0W2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMG20BQ9P0W2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMG20BQ9P0W2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HMG20BQ9P0W2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 SLC25A1P1-201ENST00000528351 927 ntBASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMG20BQ9P0W2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 AC148477.5-201ENST00000625164 1645 ntBASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 OR7E14P-202ENST00000530490 1290 ntBASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 AC139887.3-201ENST00000568585 713 ntBASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 AC116407.3-201ENST00000623905 1129 ntBASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMG20BQ9P0W2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 LINC00896-202ENST00000609602 2128 ntBASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 PRYP5-201ENST00000451909 266 ntBASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 AL022326.1-202ENST00000641533 845 ntBASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 LETM1P2-201ENST00000597330 2178 ntBASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.37■■□□□ 1.01
HMG20BQ9P0W2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 AC093909.1-201ENST00000504731 1122 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms