Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC099336.1-202ENST00000602961 463 ntBASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 PKD1P5-201ENST00000532415 10291 ntBASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PARPBPQ9NWS1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 FAM220CP-201ENST00000395253 831 ntBASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PARPBPQ9NWS1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 AC091607.1-201ENST00000490318 1060 ntBASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 TP73-AS1-210ENST00000637775 1455 ntBASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 AC100803.2-201ENST00000562459 1963 ntBASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.75■□□□□ 0.11
PARPBPQ9NWS1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 AC106820.2-201ENST00000563775 3264 ntBASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 NOC2LP2-201ENST00000407594 1944 ntBASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms