Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE1Q99829 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CPNE1Q99829 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CPNE1Q99829 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.58■□□□□ 0.41
CPNE1Q99829 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE1Q99829 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.58■□□□□ 0.41
CPNE1Q99829 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE1Q99829 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE1Q99829 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CPNE1Q99829 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE1Q99829 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE1Q99829 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE1Q99829 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE1Q99829 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE1Q99829 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE1Q99829 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE1Q99829 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE1Q99829 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE1Q99829 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE1Q99829 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
CPNE1Q99829 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.58■□□□□ 0.4
CPNE1Q99829 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
CPNE1Q99829 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE1Q99829 AL390719.2-201ENST00000606993 987 ntBASIC17.58■□□□□ 0.4
CPNE1Q99829 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CPNE1Q99829 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE1Q99829 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CPNE1Q99829 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE1Q99829 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE1Q99829 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE1Q99829 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE1Q99829 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
CPNE1Q99829 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE1Q99829 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE1Q99829 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE1Q99829 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CPNE1Q99829 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.57■□□□□ 0.4
CPNE1Q99829 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CPNE1Q99829 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE1Q99829 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE1Q99829 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE1Q99829 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CPNE1Q99829 COX5BP2-201ENST00000392354 334 ntBASIC17.57■□□□□ 0.4
CPNE1Q99829 TSPY5P-201ENST00000426936 936 ntBASIC17.57■□□□□ 0.4
CPNE1Q99829 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.57■□□□□ 0.4
CPNE1Q99829 KRT18P38-201ENST00000449496 1282 ntBASIC17.57■□□□□ 0.4
CPNE1Q99829 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.57■□□□□ 0.4
CPNE1Q99829 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE1Q99829 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE1Q99829 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.57■□□□□ 0.4
CPNE1Q99829 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
CPNE1Q99829 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE1Q99829 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE1Q99829 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE1Q99829 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CPNE1Q99829 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE1Q99829 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.56■□□□□ 0.4
CPNE1Q99829 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CPNE1Q99829 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CPNE1Q99829 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CPNE1Q99829 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CPNE1Q99829 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CPNE1Q99829 RNF152P1-201ENST00000397754 604 ntBASIC17.56■□□□□ 0.4
CPNE1Q99829 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.56■□□□□ 0.4
CPNE1Q99829 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.56■□□□□ 0.4
CPNE1Q99829 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.56■□□□□ 0.4
CPNE1Q99829 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.56■□□□□ 0.4
CPNE1Q99829 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE1Q99829 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CPNE1Q99829 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.56■□□□□ 0.4
CPNE1Q99829 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms