Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.12■□□□□ 0.33
PKP4Q99569 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP4Q99569 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PKP4Q99569 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP4Q99569 NUS1P2-201ENST00000417358 873 ntBASIC17.12■□□□□ 0.33
PKP4Q99569 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PKP4Q99569 AC002558.1-201ENST00000488906 803 ntBASIC17.12■□□□□ 0.33
PKP4Q99569 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP4Q99569 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.12■□□□□ 0.33
PKP4Q99569 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
PKP4Q99569 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.12■□□□□ 0.33
PKP4Q99569 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP4Q99569 AC138894.3-201ENST00000603787 634 ntBASIC17.12■□□□□ 0.33
PKP4Q99569 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP4Q99569 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP4Q99569 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.12■□□□□ 0.33
PKP4Q99569 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP4Q99569 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.12■□□□□ 0.33
PKP4Q99569 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.11■□□□□ 0.33
PKP4Q99569 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 AL049757.1-201ENST00000616842 1596 ntBASIC17.11■□□□□ 0.33
PKP4Q99569 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PKP4Q99569 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PKP4Q99569 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PKP4Q99569 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP4Q99569 AC103564.2-201ENST00000432853 1299 ntBASIC17.11■□□□□ 0.33
PKP4Q99569 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP4Q99569 FOSL1P1-201ENST00000511041 816 ntBASIC17.11■□□□□ 0.33
PKP4Q99569 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP4Q99569 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PKP4Q99569 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PKP4Q99569 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP4Q99569 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP4Q99569 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP4Q99569 PP12613-201ENST00000424958 2230 ntBASIC17.11■□□□□ 0.33
PKP4Q99569 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP4Q99569 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PKP4Q99569 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PKP4Q99569 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP4Q99569 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PKP4Q99569 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP4Q99569 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PKP4Q99569 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP4Q99569 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PKP4Q99569 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PKP4Q99569 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP4Q99569 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.1■□□□□ 0.33
PKP4Q99569 MIR5100-201ENST00000579544 119 ntBASIC17.1■□□□□ 0.33
PKP4Q99569 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP4Q99569 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.1■□□□□ 0.33
PKP4Q99569 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP4Q99569 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP4Q99569 PKD1P1-201ENST00000458669 6805 ntBASIC17.1■□□□□ 0.33
PKP4Q99569 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PKP4Q99569 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 KRT8P10-201ENST00000450021 1447 ntBASIC17.1■□□□□ 0.33
PKP4Q99569 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP4Q99569 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP4Q99569 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 AL138688.1-201ENST00000624851 1594 ntBASIC17.1■□□□□ 0.33
PKP4Q99569 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP4Q99569 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP4Q99569 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PKP4Q99569 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.09■□□□□ 0.33
PKP4Q99569 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.09■□□□□ 0.33
PKP4Q99569 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms