Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 AC096633.1-201ENST00000422446 749 ntBASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 AC002558.1-201ENST00000488906 803 ntBASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 KRT18P22-201ENST00000402024 1347 ntBASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
SLC44A1Q8WWI5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 MTCL1P1-201ENST00000446207 792 ntBASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC44A1Q8WWI5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms