Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 AC006557.2-201ENST00000592985 1240 ntBASIC17.69■□□□□ 0.42
CHD5Q8TDI0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 AC087163.2-201ENST00000457299 853 ntBASIC17.68■□□□□ 0.42
CHD5Q8TDI0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 AL139424.1-201ENST00000607572 797 ntBASIC17.68■□□□□ 0.42
CHD5Q8TDI0 AL805961.1-202ENST00000641562 540 ntBASIC17.68■□□□□ 0.42
CHD5Q8TDI0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 AC006504.4-201ENST00000592118 1568 ntBASIC17.68■□□□□ 0.42
CHD5Q8TDI0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 AC136632.2-201ENST00000512891 861 ntBASIC17.68■□□□□ 0.42
CHD5Q8TDI0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CHD5Q8TDI0 AC097637.2-201ENST00000624096 1997 ntBASIC17.67■□□□□ 0.42
CHD5Q8TDI0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 IL9RP2-201ENST00000423948 1312 ntBASIC17.67■□□□□ 0.42
CHD5Q8TDI0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 AL049840.3-201ENST00000602669 611 ntBASIC17.67■□□□□ 0.42
CHD5Q8TDI0 AC064862.7-201ENST00000604520 867 ntBASIC17.67■□□□□ 0.42
CHD5Q8TDI0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD5Q8TDI0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 AL589182.2-201ENST00000619332 1049 ntBASIC17.66■□□□□ 0.42
CHD5Q8TDI0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms