Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST3H2BBQ8N257 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST3H2BBQ8N257 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST3H2BBQ8N257 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 KRT18P41-201ENST00000518924 1277 ntBASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 KRT125P-201ENST00000546827 989 ntBASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 CCDC92B-201ENST00000575506 885 ntBASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 LINC01451-201ENST00000623792 534 ntBASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST3H2BBQ8N257 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HIST3H2BBQ8N257 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 PPT1-215ENST00000641471 2368 ntBASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 AC008764.7-201ENST00000593779 1081 ntBASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
HIST3H2BBQ8N257 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms