Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 BX276092.7-203ENST00000637198 1536 ntBASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 TSPY14P-201ENST00000303979 915 ntBASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 AC098590.1-201ENST00000468126 897 ntBASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 C2orf69P3-201ENST00000565542 1120 ntBASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 Z99916.2-201ENST00000604037 246 ntBASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM1Q86UE6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 MIR1238-201ENST00000408483 83 ntBASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 GCSHP5-201ENST00000443090 522 ntBASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRTM1Q86UE6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM1Q86UE6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM1Q86UE6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM1Q86UE6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM1Q86UE6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.27■□□□□ 0.03
LRRTM1Q86UE6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LRRTM1Q86UE6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.27■□□□□ 0.03
LRRTM1Q86UE6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms