Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 MMP23A-201ENST00000234610 1017 ntBASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD4Q6ZW05 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PTCHD4Q6ZW05 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD4Q6ZW05 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms