Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RBM48Q5RL73 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RBM48Q5RL73 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RBM48Q5RL73 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 AC026271.3-201ENST00000571884 352 ntBASIC16.07■□□□□ 0.16
RBM48Q5RL73 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 AC130371.2-201ENST00000619443 611 ntBASIC16.07■□□□□ 0.16
RBM48Q5RL73 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 LINC01311-201ENST00000565162 1445 ntBASIC16.07■□□□□ 0.16
RBM48Q5RL73 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RBM48Q5RL73 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RBM48Q5RL73 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 MIR3180-4-201ENST00000582223 153 ntBASIC16.06■□□□□ 0.16
RBM48Q5RL73 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RBM48Q5RL73 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RBM48Q5RL73 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RBM48Q5RL73 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RBM48Q5RL73 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.05■□□□□ 0.16
RBM48Q5RL73 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RBM48Q5RL73 AC092171.3-201ENST00000610122 2651 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms