Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 NUS1P2-201ENST00000417358 873 ntBASIC15.73■□□□□ 0.11
H3F3AP84243 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H3F3AP84243 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.73■□□□□ 0.11
H3F3AP84243 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.73■□□□□ 0.11
H3F3AP84243 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.73■□□□□ 0.11
H3F3AP84243 KRT18P31-201ENST00000506277 1292 ntBASIC15.73■□□□□ 0.11
H3F3AP84243 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.73■□□□□ 0.11
H3F3AP84243 PRELID1P1-202ENST00000567272 903 ntBASIC15.73■□□□□ 0.11
H3F3AP84243 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.73■□□□□ 0.11
H3F3AP84243 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.73■□□□□ 0.11
H3F3AP84243 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.73■□□□□ 0.11
H3F3AP84243 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.73■□□□□ 0.11
H3F3AP84243 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.73■□□□□ 0.11
H3F3AP84243 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.73■□□□□ 0.11
H3F3AP84243 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.73■□□□□ 0.11
H3F3AP84243 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.73■□□□□ 0.11
H3F3AP84243 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.73■□□□□ 0.11
H3F3AP84243 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H3F3AP84243 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.72■□□□□ 0.11
H3F3AP84243 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.72■□□□□ 0.11
H3F3AP84243 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.72■□□□□ 0.11
H3F3AP84243 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
H3F3AP84243 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 KRT8P10-201ENST00000450021 1447 ntBASIC15.72■□□□□ 0.11
H3F3AP84243 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
H3F3AP84243 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 MYCLP1-201ENST00000372451 1075 ntBASIC15.72■□□□□ 0.11
H3F3AP84243 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.72■□□□□ 0.11
H3F3AP84243 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.72■□□□□ 0.11
H3F3AP84243 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.72■□□□□ 0.11
H3F3AP84243 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.72■□□□□ 0.11
H3F3AP84243 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 AL591684.3-201ENST00000605187 298 ntBASIC15.72■□□□□ 0.11
H3F3AP84243 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.72■□□□□ 0.11
H3F3AP84243 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.72■□□□□ 0.11
H3F3AP84243 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.72■□□□□ 0.11
H3F3AP84243 AP000867.4-201ENST00000641616 219 ntBASIC15.72■□□□□ 0.11
H3F3AP84243 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
H3F3AP84243 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.72■□□□□ 0.11
H3F3AP84243 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
H3F3AP84243 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3AP84243 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
H3F3AP84243 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
H3F3AP84243 PMPCAP1-201ENST00000508114 1576 ntBASIC15.71■□□□□ 0.11
H3F3AP84243 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.71■□□□□ 0.11
H3F3AP84243 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
H3F3AP84243 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
H3F3AP84243 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.71■□□□□ 0.11
H3F3AP84243 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.71■□□□□ 0.11
H3F3AP84243 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.71■□□□□ 0.11
H3F3AP84243 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.71■□□□□ 0.11
H3F3AP84243 IGHV3-52-201ENST00000519770 353 ntBASIC15.71■□□□□ 0.11
H3F3AP84243 AC109462.3-201ENST00000573934 613 ntBASIC15.71■□□□□ 0.11
H3F3AP84243 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.71■□□□□ 0.11
H3F3AP84243 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.71■□□□□ 0.11
H3F3AP84243 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.71■□□□□ 0.11
H3F3AP84243 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.71■□□□□ 0.11
H3F3AP84243 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3AP84243 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms