Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ERVFC1-1P60608 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERVFC1-1P60608 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ERVFC1-1P60608 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERVFC1-1P60608 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERVFC1-1P60608 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERVFC1-1P60608 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ERVFC1-1P60608 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ERVFC1-1P60608 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 AC067930.6-201ENST00000623257 4947 ntBASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 KRT8P11-201ENST00000409686 1436 ntBASIC13.68□□□□□ -0.22
ERVFC1-1P60608 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 ESRRAP1-201ENST00000400596 1257 ntBASIC13.68□□□□□ -0.22
ERVFC1-1P60608 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.68□□□□□ -0.22
ERVFC1-1P60608 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ERVFC1-1P60608 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms