Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.22■□□□□ 0.67
NCKAP1LP55160 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKAP1LP55160 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 TPM4P1-201ENST00000436100 807 ntBASIC19.21■□□□□ 0.67
NCKAP1LP55160 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NCKAP1LP55160 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKAP1LP55160 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
NCKAP1LP55160 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 PCDHB18P-201ENST00000524813 2368 ntBASIC19.2■□□□□ 0.66
NCKAP1LP55160 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 PRYP5-201ENST00000451909 266 ntBASIC19.2■□□□□ 0.66
NCKAP1LP55160 SCARNA2-201ENST00000458748 420 ntBASIC19.2■□□□□ 0.66
NCKAP1LP55160 BX005266.1-201ENST00000473402 457 ntBASIC19.2■□□□□ 0.66
NCKAP1LP55160 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NCKAP1LP55160 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKAP1LP55160 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCKAP1LP55160 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKAP1LP55160 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKAP1LP55160 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCKAP1LP55160 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCKAP1LP55160 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCKAP1LP55160 SIGLEC30P-201ENST00000455569 941 ntBASIC19.19■□□□□ 0.66
NCKAP1LP55160 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 AL121894.2-201ENST00000602977 491 ntBASIC19.19■□□□□ 0.66
NCKAP1LP55160 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms