Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA4P51532 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
SMARCA4P51532 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA4P51532 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC31.11■■■□□ 2.57
SMARCA4P51532 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC31.11■■■□□ 2.57
SMARCA4P51532 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC31.11■■■□□ 2.57
SMARCA4P51532 AL009183.1-201ENST00000603760 355 ntBASIC31.11■■■□□ 2.57
SMARCA4P51532 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC31.11■■■□□ 2.57
SMARCA4P51532 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC31.11■■■□□ 2.57
SMARCA4P51532 AL020996.1-203ENST00000536896 2307 ntBASIC31.11■■■□□ 2.57
SMARCA4P51532 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA4P51532 REXO1L11P-201ENST00000620964 1927 ntBASIC31.11■■■□□ 2.57
SMARCA4P51532 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC31.11■■■□□ 2.57
SMARCA4P51532 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA4P51532 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA4P51532 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA4P51532 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC31.1■■■□□ 2.57
SMARCA4P51532 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC31.1■■■□□ 2.57
SMARCA4P51532 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC31.1■■■□□ 2.57
SMARCA4P51532 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC31.1■■■□□ 2.57
SMARCA4P51532 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC31.1■■■□□ 2.57
SMARCA4P51532 LINC01225-203ENST00000563550 1244 ntBASIC31.1■■■□□ 2.57
SMARCA4P51532 SPDYE22P-201ENST00000582158 798 ntBASIC31.1■■■□□ 2.57
SMARCA4P51532 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC31.1■■■□□ 2.57
SMARCA4P51532 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA4P51532 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA4P51532 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC31.09■■■□□ 2.57
SMARCA4P51532 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC31.09■■■□□ 2.57
SMARCA4P51532 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC31.09■■■□□ 2.57
SMARCA4P51532 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC31.09■■■□□ 2.57
SMARCA4P51532 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC31.09■■■□□ 2.57
SMARCA4P51532 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC31.09■■■□□ 2.57
SMARCA4P51532 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC31.09■■■□□ 2.57
SMARCA4P51532 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC31.09■■■□□ 2.57
SMARCA4P51532 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA4P51532 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 GNAS-203ENST00000306120 1878 ntBASIC31.08■■■□□ 2.57
SMARCA4P51532 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC31.08■■■□□ 2.57
SMARCA4P51532 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
SMARCA4P51532 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC31.08■■■□□ 2.57
SMARCA4P51532 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA4P51532 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
SMARCA4P51532 HNRNPRP1-201ENST00000453465 1695 ntBASIC31.07■■■□□ 2.57
SMARCA4P51532 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
SMARCA4P51532 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC31.07■■■□□ 2.56
SMARCA4P51532 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC31.07■■■□□ 2.56
SMARCA4P51532 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SMARCA4P51532 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC31.07■■■□□ 2.56
SMARCA4P51532 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SMARCA4P51532 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC31.06■■■□□ 2.56
SMARCA4P51532 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC31.06■■■□□ 2.56
SMARCA4P51532 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC31.06■■■□□ 2.56
SMARCA4P51532 AC069120.2-201ENST00000524091 540 ntBASIC31.06■■■□□ 2.56
SMARCA4P51532 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
SMARCA4P51532 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC31.06■■■□□ 2.56
SMARCA4P51532 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA4P51532 MIR6080-201ENST00000617359 66 ntBASIC31.06■■■□□ 2.56
SMARCA4P51532 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA4P51532 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA4P51532 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA4P51532 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA4P51532 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA4P51532 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC31.06■■■□□ 2.56
SMARCA4P51532 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA4P51532 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA4P51532 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA4P51532 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC31.06■■■□□ 2.56
SMARCA4P51532 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC31.06■■■□□ 2.56
SMARCA4P51532 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
SMARCA4P51532 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
SMARCA4P51532 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC31.05■■■□□ 2.56
SMARCA4P51532 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SMARCA4P51532 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC31.05■■■□□ 2.56
SMARCA4P51532 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SMARCA4P51532 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SMARCA4P51532 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms