Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF144AP50876 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF144AP50876 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF144AP50876 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF144AP50876 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF144AP50876 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.37■□□□□ 0.21
RNF144AP50876 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF144AP50876 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF144AP50876 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF144AP50876 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RNF144AP50876 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RNF144AP50876 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF144AP50876 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF144AP50876 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF144AP50876 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RNF144AP50876 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RNF144AP50876 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RNF144AP50876 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 AL845331.1-201ENST00000424978 1190 ntBASIC16.36■□□□□ 0.21
RNF144AP50876 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF144AP50876 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF144AP50876 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF144AP50876 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
RNF144AP50876 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF144AP50876 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF144AP50876 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RNF144AP50876 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF144AP50876 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RNF144AP50876 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 IER3-202ENST00000376377 1350 ntBASIC16.36■□□□□ 0.21
RNF144AP50876 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF144AP50876 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF144AP50876 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
RNF144AP50876 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
RNF144AP50876 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF144AP50876 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RNF144AP50876 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RNF144AP50876 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF144AP50876 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF144AP50876 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF144AP50876 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF144AP50876 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF144AP50876 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
RNF144AP50876 CROCCP1-201ENST00000426910 5675 ntBASIC16.35■□□□□ 0.21
RNF144AP50876 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF144AP50876 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF144AP50876 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF144AP50876 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RNF144AP50876 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RNF144AP50876 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RNF144AP50876 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms