Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC11.9□□□□□ -0.5
CXCL5P42830 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.9□□□□□ -0.5
CXCL5P42830 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.9□□□□□ -0.5
CXCL5P42830 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.9□□□□□ -0.5
CXCL5P42830 TK2-204ENST00000525974 1178 ntTSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC11.9□□□□□ -0.5
CXCL5P42830 BX088651.1-201ENST00000540551 451 ntBASIC11.9□□□□□ -0.5
CXCL5P42830 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.9□□□□□ -0.5
CXCL5P42830 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC11.9□□□□□ -0.5
CXCL5P42830 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC11.9□□□□□ -0.5
CXCL5P42830 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CXCL5P42830 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 AC092850.2-201ENST00000623821 2697 ntBASIC11.9□□□□□ -0.5
CXCL5P42830 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CXCL5P42830 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CXCL5P42830 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.9□□□□□ -0.51
CXCL5P42830 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 ILF2-202ENST00000368681 726 ntTSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 AL355355.2-201ENST00000442321 338 ntBASIC11.89□□□□□ -0.51
CXCL5P42830 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC11.89□□□□□ -0.51
CXCL5P42830 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC11.89□□□□□ -0.51
CXCL5P42830 AP003041.3-201ENST00000527151 707 ntBASIC11.89□□□□□ -0.51
CXCL5P42830 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 SPIB-206ENST00000596074 847 ntTSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CXCL5P42830 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CXCL5P42830 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC11.89□□□□□ -0.51
CXCL5P42830 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CXCL5P42830 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CXCL5P42830 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.88□□□□□ -0.51
CXCL5P42830 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CXCL5P42830 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC11.88□□□□□ -0.51
CXCL5P42830 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 AC099343.3-201ENST00000605834 2503 ntBASIC11.88□□□□□ -0.51
CXCL5P42830 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL5P42830 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms