Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.2■□□□□ 0.66
USP8P40818 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
USP8P40818 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP8P40818 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP8P40818 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP8P40818 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP8P40818 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP8P40818 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.2■□□□□ 0.66
USP8P40818 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.2■□□□□ 0.66
USP8P40818 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP8P40818 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.2■□□□□ 0.66
USP8P40818 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.2■□□□□ 0.66
USP8P40818 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.2■□□□□ 0.66
USP8P40818 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.2■□□□□ 0.66
USP8P40818 RNF126P1-202ENST00000569893 925 ntBASIC19.2■□□□□ 0.66
USP8P40818 AC009154.2-201ENST00000621177 724 ntBASIC19.2■□□□□ 0.66
USP8P40818 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.2■□□□□ 0.66
USP8P40818 Z83836.1-201ENST00000624605 1642 ntBASIC19.2■□□□□ 0.66
USP8P40818 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP8P40818 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
USP8P40818 AC009949.1-201ENST00000623048 1830 ntBASIC19.2■□□□□ 0.66
USP8P40818 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP8P40818 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.2■□□□□ 0.66
USP8P40818 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP8P40818 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP8P40818 AL391005.1-201ENST00000623953 2435 ntBASIC19.2■□□□□ 0.66
USP8P40818 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
USP8P40818 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
USP8P40818 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP8P40818 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP8P40818 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.19■□□□□ 0.66
USP8P40818 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
USP8P40818 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
USP8P40818 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
USP8P40818 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP8P40818 AL355312.1-201ENST00000407115 2176 ntBASIC19.19■□□□□ 0.66
USP8P40818 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP8P40818 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP8P40818 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.19■□□□□ 0.66
USP8P40818 PCDHA12-202ENST00000613593 2588 ntBASIC19.19■□□□□ 0.66
USP8P40818 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP8P40818 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP8P40818 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.19■□□□□ 0.66
USP8P40818 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP8P40818 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
USP8P40818 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
USP8P40818 AL049597.2-201ENST00000565575 961 ntBASIC19.19■□□□□ 0.66
USP8P40818 AC116407.2-201ENST00000613639 860 ntBASIC19.19■□□□□ 0.66
USP8P40818 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.19■□□□□ 0.66
USP8P40818 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.19■□□□□ 0.66
USP8P40818 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
USP8P40818 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP8P40818 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
USP8P40818 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.19■□□□□ 0.66
USP8P40818 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP8P40818 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
USP8P40818 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.18■□□□□ 0.66
USP8P40818 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.18■□□□□ 0.66
USP8P40818 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.18■□□□□ 0.66
USP8P40818 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.18■□□□□ 0.66
USP8P40818 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.18■□□□□ 0.66
USP8P40818 SPDYE13P-201ENST00000445314 798 ntBASIC19.18■□□□□ 0.66
USP8P40818 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.18■□□□□ 0.66
USP8P40818 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.18■□□□□ 0.66
USP8P40818 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.18■□□□□ 0.66
USP8P40818 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
USP8P40818 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.18■□□□□ 0.66
USP8P40818 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP8P40818 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.17■□□□□ 0.66
USP8P40818 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.17■□□□□ 0.66
USP8P40818 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.17■□□□□ 0.66
USP8P40818 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
USP8P40818 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
USP8P40818 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms