Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.17■■□□□ 1.14
COL15A1P39059 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.17■■□□□ 1.14
COL15A1P39059 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
COL15A1P39059 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 AC116407.2-201ENST00000613639 860 ntBASIC22.17■■□□□ 1.14
COL15A1P39059 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.17■■□□□ 1.14
COL15A1P39059 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.17■■□□□ 1.14
COL15A1P39059 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 AC025580.3-201ENST00000617932 1424 ntBASIC22.17■■□□□ 1.14
COL15A1P39059 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL15A1P39059 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL15A1P39059 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL15A1P39059 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL15A1P39059 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL15A1P39059 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.16■■□□□ 1.14
COL15A1P39059 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL15A1P39059 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.16■■□□□ 1.14
COL15A1P39059 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC22.16■■□□□ 1.14
COL15A1P39059 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
COL15A1P39059 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC22.16■■□□□ 1.14
COL15A1P39059 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.16■■□□□ 1.14
COL15A1P39059 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL15A1P39059 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL15A1P39059 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL15A1P39059 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL15A1P39059 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
COL15A1P39059 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.16■■□□□ 1.14
COL15A1P39059 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
COL15A1P39059 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.16■■□□□ 1.14
COL15A1P39059 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC22.15■■□□□ 1.14
COL15A1P39059 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC22.15■■□□□ 1.14
COL15A1P39059 AC002558.1-201ENST00000488906 803 ntBASIC22.15■■□□□ 1.14
COL15A1P39059 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC22.15■■□□□ 1.14
COL15A1P39059 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC22.15■■□□□ 1.14
COL15A1P39059 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.15■■□□□ 1.14
COL15A1P39059 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC22.15■■□□□ 1.14
COL15A1P39059 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC22.15■■□□□ 1.14
COL15A1P39059 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.15■■□□□ 1.14
COL15A1P39059 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.15■■□□□ 1.14
COL15A1P39059 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.15■■□□□ 1.14
COL15A1P39059 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL15A1P39059 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.15■■□□□ 1.14
COL15A1P39059 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL15A1P39059 AL139400.1-201ENST00000366220 510 ntBASIC22.14■■□□□ 1.14
COL15A1P39059 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
COL15A1P39059 SLC25A6P5-201ENST00000435663 894 ntBASIC22.14■■□□□ 1.14
COL15A1P39059 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.14■■□□□ 1.14
COL15A1P39059 ACTG1P14-201ENST00000446382 1122 ntBASIC22.14■■□□□ 1.14
COL15A1P39059 AC074386.1-202ENST00000463561 864 ntBASIC22.14■■□□□ 1.14
COL15A1P39059 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
COL15A1P39059 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.14■■□□□ 1.14
COL15A1P39059 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC22.14■■□□□ 1.14
COL15A1P39059 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC22.14■■□□□ 1.14
COL15A1P39059 METTL23-205ENST00000588302 925 ntTSL 5 BASIC22.14■■□□□ 1.14
COL15A1P39059 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL15A1P39059 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
COL15A1P39059 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
COL15A1P39059 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL15A1P39059 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
COL15A1P39059 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL15A1P39059 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL15A1P39059 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL15A1P39059 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.14■■□□□ 1.13
COL15A1P39059 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL15A1P39059 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.14■■□□□ 1.13
COL15A1P39059 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
COL15A1P39059 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL15A1P39059 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL15A1P39059 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL15A1P39059 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL15A1P39059 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
COL15A1P39059 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
COL15A1P39059 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 RNF34-208ENST00000555076 593 ntTSL 3 BASIC22.13■■□□□ 1.13
COL15A1P39059 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
COL15A1P39059 AC092902.6-201ENST00000641783 218 ntBASIC22.13■■□□□ 1.13
COL15A1P39059 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.13■■□□□ 1.13
COL15A1P39059 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC22.13■■□□□ 1.13
COL15A1P39059 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms