Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT2P35908 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT2P35908 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT2P35908 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT2P35908 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT2P35908 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT2P35908 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KRT2P35908 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT2P35908 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KRT2P35908 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT2P35908 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
KRT2P35908 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.15■□□□□ 0.82
KRT2P35908 HCG4P8-203ENST00000443049 980 ntBASIC20.15■□□□□ 0.82
KRT2P35908 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.15■□□□□ 0.82
KRT2P35908 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT2P35908 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.15■□□□□ 0.82
KRT2P35908 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT2P35908 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KRT2P35908 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT2P35908 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
KRT2P35908 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
KRT2P35908 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT2P35908 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT2P35908 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT2P35908 AL023806.1-201ENST00000603994 1649 ntBASIC20.14■□□□□ 0.81
KRT2P35908 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT2P35908 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT2P35908 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT2P35908 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT2P35908 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT2P35908 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
KRT2P35908 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT2P35908 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
KRT2P35908 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT2P35908 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT2P35908 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT2P35908 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
KRT2P35908 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
KRT2P35908 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT2P35908 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT2P35908 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT2P35908 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT2P35908 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT2P35908 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
KRT2P35908 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
KRT2P35908 AL353593.2-201ENST00000602529 1483 ntBASIC20.13■□□□□ 0.81
KRT2P35908 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
KRT2P35908 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 NUS1P2-201ENST00000417358 873 ntBASIC20.13■□□□□ 0.81
KRT2P35908 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.13■□□□□ 0.81
KRT2P35908 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT2P35908 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.13■□□□□ 0.81
KRT2P35908 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.13■□□□□ 0.81
KRT2P35908 AC138894.3-201ENST00000603787 634 ntBASIC20.13■□□□□ 0.81
KRT2P35908 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT2P35908 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT2P35908 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
KRT2P35908 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT2P35908 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
KRT2P35908 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
KRT2P35908 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
KRT2P35908 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
KRT2P35908 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT2P35908 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
KRT2P35908 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT2P35908 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT2P35908 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT2P35908 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT2P35908 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT2P35908 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
KRT2P35908 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.12■□□□□ 0.81
KRT2P35908 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT2P35908 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
KRT2P35908 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT2P35908 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT2P35908 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT2P35908 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms