Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.88■□□□□ 0.29
PTX3P26022 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.88■□□□□ 0.29
PTX3P26022 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.88■□□□□ 0.29
PTX3P26022 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.88■□□□□ 0.29
PTX3P26022 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PTX3P26022 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.88■□□□□ 0.29
PTX3P26022 KRT18P1-202ENST00000452408 1331 ntBASIC16.88■□□□□ 0.29
PTX3P26022 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.88■□□□□ 0.29
PTX3P26022 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PTX3P26022 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PTX3P26022 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PTX3P26022 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PTX3P26022 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PTX3P26022 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.87■□□□□ 0.29
PTX3P26022 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.87■□□□□ 0.29
PTX3P26022 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PTX3P26022 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.87■□□□□ 0.29
PTX3P26022 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.87■□□□□ 0.29
PTX3P26022 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.87■□□□□ 0.29
PTX3P26022 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.87■□□□□ 0.29
PTX3P26022 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.87■□□□□ 0.29
PTX3P26022 AC002558.1-201ENST00000488906 803 ntBASIC16.87■□□□□ 0.29
PTX3P26022 KRT18P35-201ENST00000510488 1269 ntBASIC16.87■□□□□ 0.29
PTX3P26022 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.87■□□□□ 0.29
PTX3P26022 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.87■□□□□ 0.29
PTX3P26022 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.87■□□□□ 0.29
PTX3P26022 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PTX3P26022 AC005336.2-201ENST00000593183 939 ntBASIC16.87■□□□□ 0.29
PTX3P26022 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PTX3P26022 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTX3P26022 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PTX3P26022 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTX3P26022 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.87■□□□□ 0.29
PTX3P26022 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.87■□□□□ 0.29
PTX3P26022 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTX3P26022 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PTX3P26022 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.86■□□□□ 0.29
PTX3P26022 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
PTX3P26022 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.86■□□□□ 0.29
PTX3P26022 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTX3P26022 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.86■□□□□ 0.29
PTX3P26022 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.86■□□□□ 0.29
PTX3P26022 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PTX3P26022 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PTX3P26022 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 ARMC10P1-201ENST00000313754 855 ntBASIC16.86■□□□□ 0.29
PTX3P26022 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.86■□□□□ 0.29
PTX3P26022 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.86■□□□□ 0.29
PTX3P26022 AC122714.2-201ENST00000502787 707 ntBASIC16.86■□□□□ 0.29
PTX3P26022 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.86■□□□□ 0.29
PTX3P26022 AC009533.2-201ENST00000543664 586 ntBASIC16.86■□□□□ 0.29
PTX3P26022 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.86■□□□□ 0.29
PTX3P26022 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.86■□□□□ 0.29
PTX3P26022 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTX3P26022 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.86■□□□□ 0.29
PTX3P26022 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.86■□□□□ 0.29
PTX3P26022 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.86■□□□□ 0.29
PTX3P26022 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTX3P26022 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.86■□□□□ 0.29
PTX3P26022 AC141586.5-201ENST00000624546 2050 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms