Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.4■□□□□ 0.22
NR4A1P22736 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.4■□□□□ 0.22
NR4A1P22736 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.4■□□□□ 0.22
NR4A1P22736 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
NR4A1P22736 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.4■□□□□ 0.22
NR4A1P22736 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.4■□□□□ 0.22
NR4A1P22736 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.4■□□□□ 0.22
NR4A1P22736 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NR4A1P22736 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NR4A1P22736 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NR4A1P22736 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 KRT8P32-201ENST00000512863 1461 ntBASIC16.4■□□□□ 0.22
NR4A1P22736 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NR4A1P22736 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.4■□□□□ 0.22
NR4A1P22736 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NR4A1P22736 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.4■□□□□ 0.22
NR4A1P22736 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR4A1P22736 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
NR4A1P22736 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR4A1P22736 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.39■□□□□ 0.21
NR4A1P22736 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NR4A1P22736 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR4A1P22736 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR4A1P22736 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NR4A1P22736 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR4A1P22736 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR4A1P22736 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.39■□□□□ 0.21
NR4A1P22736 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.39■□□□□ 0.21
NR4A1P22736 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.39■□□□□ 0.21
NR4A1P22736 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.39■□□□□ 0.21
NR4A1P22736 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NR4A1P22736 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
NR4A1P22736 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR4A1P22736 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR4A1P22736 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.39■□□□□ 0.21
NR4A1P22736 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NR4A1P22736 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR4A1P22736 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR4A1P22736 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.39■□□□□ 0.21
NR4A1P22736 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.39■□□□□ 0.21
NR4A1P22736 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 AC092338.2-201ENST00000568827 1415 ntBASIC16.38■□□□□ 0.21
NR4A1P22736 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
NR4A1P22736 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
NR4A1P22736 AC007663.1-201ENST00000438948 1240 ntBASIC16.38■□□□□ 0.21
NR4A1P22736 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 ECEL1P2-202ENST00000465689 757 ntBASIC16.38■□□□□ 0.21
NR4A1P22736 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.38■□□□□ 0.21
NR4A1P22736 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.38■□□□□ 0.21
NR4A1P22736 AL353719.1-201ENST00000566847 864 ntBASIC16.38■□□□□ 0.21
NR4A1P22736 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.38■□□□□ 0.21
NR4A1P22736 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 AC005363.2-201ENST00000618631 242 ntBASIC16.38■□□□□ 0.21
NR4A1P22736 AC010653.2-201ENST00000623505 997 ntBASIC16.38■□□□□ 0.21
NR4A1P22736 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NR4A1P22736 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.38■□□□□ 0.21
NR4A1P22736 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.38■□□□□ 0.21
NR4A1P22736 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.38■□□□□ 0.21
NR4A1P22736 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
NR4A1P22736 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NR4A1P22736 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR4A1P22736 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR4A1P22736 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NR4A1P22736 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NR4A1P22736 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NR4A1P22736 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NR4A1P22736 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR4A1P22736 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NR4A1P22736 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR4A1P22736 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.37■□□□□ 0.21
NR4A1P22736 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms