Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC130P13994 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 AC009078.2-202ENST00000463353 338 ntBASIC18.62■□□□□ 0.57
CCDC130P13994 AC002558.1-201ENST00000488906 803 ntBASIC18.62■□□□□ 0.57
CCDC130P13994 SART3-203ENST00000546611 1184 ntBASIC18.62■□□□□ 0.57
CCDC130P13994 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC130P13994 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC130P13994 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC130P13994 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC130P13994 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC130P13994 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC130P13994 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC130P13994 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
CCDC130P13994 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC130P13994 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC130P13994 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC130P13994 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC130P13994 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC130P13994 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC130P13994 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC130P13994 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC130P13994 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC130P13994 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC130P13994 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC130P13994 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 IGHV3-52-201ENST00000519770 353 ntBASIC18.61■□□□□ 0.57
CCDC130P13994 AP002469.2-201ENST00000531724 424 ntBASIC18.61■□□□□ 0.57
CCDC130P13994 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC130P13994 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC130P13994 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC130P13994 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC130P13994 AC004817.3-201ENST00000602957 2129 ntBASIC18.61■□□□□ 0.57
CCDC130P13994 LTB4R2-202ENST00000528054 3092 ntBASIC18.6■□□□□ 0.57
CCDC130P13994 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC130P13994 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC130P13994 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC130P13994 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC130P13994 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC130P13994 KLF4P1-201ENST00000412782 1185 ntBASIC18.6■□□□□ 0.57
CCDC130P13994 BX005266.1-201ENST00000473402 457 ntBASIC18.6■□□□□ 0.57
CCDC130P13994 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC130P13994 AL160237.2-201ENST00000556165 472 ntBASIC18.6■□□□□ 0.57
CCDC130P13994 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC130P13994 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC130P13994 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC130P13994 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.6■□□□□ 0.57
CCDC130P13994 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC130P13994 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC130P13994 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC130P13994 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 GNAS-203ENST00000306120 1878 ntBASIC18.6■□□□□ 0.57
CCDC130P13994 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC130P13994 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC130P13994 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC130P13994 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC130P13994 AC148477.5-201ENST00000625164 1645 ntBASIC18.6■□□□□ 0.57
CCDC130P13994 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC130P13994 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC130P13994 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC130P13994 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC130P13994 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC130P13994 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC130P13994 AL356309.3-201ENST00000624132 1934 ntBASIC18.59■□□□□ 0.57
CCDC130P13994 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC130P13994 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC130P13994 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms