Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.19■□□□□ 0.66
COL1A2P08123 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A2P08123 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A2P08123 KRT18P2-201ENST00000447938 1258 ntBASIC19.19■□□□□ 0.66
COL1A2P08123 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A2P08123 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
COL1A2P08123 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL1A2P08123 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A2P08123 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL1A2P08123 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A2P08123 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COL1A2P08123 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.19■□□□□ 0.66
COL1A2P08123 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A2P08123 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A2P08123 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 RPSAP43-201ENST00000402237 625 ntBASIC19.19■□□□□ 0.66
COL1A2P08123 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.19■□□□□ 0.66
COL1A2P08123 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.19■□□□□ 0.66
COL1A2P08123 GPX1P2-201ENST00000429271 606 ntBASIC19.19■□□□□ 0.66
COL1A2P08123 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.19■□□□□ 0.66
COL1A2P08123 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A2P08123 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
COL1A2P08123 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A2P08123 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A2P08123 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
COL1A2P08123 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.18■□□□□ 0.66
COL1A2P08123 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A2P08123 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.18■□□□□ 0.66
COL1A2P08123 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.18■□□□□ 0.66
COL1A2P08123 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A2P08123 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A2P08123 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A2P08123 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL1A2P08123 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COL1A2P08123 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A2P08123 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A2P08123 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A2P08123 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.18■□□□□ 0.66
COL1A2P08123 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.18■□□□□ 0.66
COL1A2P08123 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.18■□□□□ 0.66
COL1A2P08123 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.18■□□□□ 0.66
COL1A2P08123 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.18■□□□□ 0.66
COL1A2P08123 AC010327.4-202ENST00000591484 748 ntBASIC19.18■□□□□ 0.66
COL1A2P08123 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A2P08123 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.18■□□□□ 0.66
COL1A2P08123 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL1A2P08123 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.17■□□□□ 0.66
COL1A2P08123 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.17■□□□□ 0.66
COL1A2P08123 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COL1A2P08123 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.17■□□□□ 0.66
COL1A2P08123 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.17■□□□□ 0.66
COL1A2P08123 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COL1A2P08123 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COL1A2P08123 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL1A2P08123 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
COL1A2P08123 IGLL3P-201ENST00000412472 434 ntBASIC19.17■□□□□ 0.66
COL1A2P08123 AC023274.1-201ENST00000418278 595 ntBASIC19.17■□□□□ 0.66
COL1A2P08123 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
COL1A2P08123 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.17■□□□□ 0.66
COL1A2P08123 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.17■□□□□ 0.66
COL1A2P08123 MTDHP5-201ENST00000598980 586 ntBASIC19.17■□□□□ 0.66
COL1A2P08123 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.17■□□□□ 0.66
COL1A2P08123 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A2P08123 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A2P08123 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A2P08123 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A2P08123 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A2P08123 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL1A2P08123 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A2P08123 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
COL1A2P08123 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A2P08123 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.16■□□□□ 0.66
COL1A2P08123 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
COL1A2P08123 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A2P08123 MCCD1P2-201ENST00000423228 335 ntBASIC19.16■□□□□ 0.66
COL1A2P08123 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms