Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.41□□□□□ -0.26
TCRAP04437 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TCRAP04437 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
TCRAP04437 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.41□□□□□ -0.26
TCRAP04437 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.41□□□□□ -0.26
TCRAP04437 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.41□□□□□ -0.26
TCRAP04437 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.41□□□□□ -0.26
TCRAP04437 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TCRAP04437 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TCRAP04437 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 AC116353.5-201ENST00000638148 1699 ntBASIC13.4□□□□□ -0.26
TCRAP04437 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TCRAP04437 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.4□□□□□ -0.26
TCRAP04437 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TCRAP04437 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.4□□□□□ -0.26
TCRAP04437 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TCRAP04437 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TCRAP04437 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.4□□□□□ -0.26
TCRAP04437 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.4□□□□□ -0.26
TCRAP04437 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.4□□□□□ -0.26
TCRAP04437 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.4□□□□□ -0.26
TCRAP04437 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.4□□□□□ -0.26
TCRAP04437 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
TCRAP04437 AP001412.1-201ENST00000608405 714 ntBASIC13.4□□□□□ -0.26
TCRAP04437 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
TCRAP04437 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.4□□□□□ -0.26
TCRAP04437 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TCRAP04437 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TCRAP04437 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 AC005915.1-201ENST00000624912 2018 ntBASIC13.4□□□□□ -0.26
TCRAP04437 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TCRAP04437 PCDH8P1-201ENST00000428983 2773 ntBASIC13.4□□□□□ -0.26
TCRAP04437 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.4□□□□□ -0.26
TCRAP04437 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TCRAP04437 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
TCRAP04437 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRAP04437 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TCRAP04437 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 AC046158.3-201ENST00000624947 2558 ntBASIC13.39□□□□□ -0.27
TCRAP04437 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRAP04437 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 AL139384.1-201ENST00000612143 3047 ntBASIC13.39□□□□□ -0.27
TCRAP04437 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.39□□□□□ -0.27
TCRAP04437 ID1-201ENST00000376105 1233 ntBASIC13.39□□□□□ -0.27
TCRAP04437 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
TCRAP04437 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TCRAP04437 KRT18P65-201ENST00000439811 1286 ntBASIC13.39□□□□□ -0.27
TCRAP04437 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRAP04437 AC113404.2-201ENST00000507884 177 ntBASIC13.39□□□□□ -0.27
TCRAP04437 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.39□□□□□ -0.27
TCRAP04437 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRAP04437 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
TCRAP04437 AC116562.4-202ENST00000641738 218 ntBASIC13.39□□□□□ -0.27
TCRAP04437 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 KRT8P47-201ENST00000604727 1398 ntBASIC13.39□□□□□ -0.27
TCRAP04437 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRAP04437 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.39□□□□□ -0.27
TCRAP04437 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TCRAP04437 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TCRAP04437 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TCRAP04437 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms