Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LMNAP02545 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.39■□□□□ 0.54
LMNAP02545 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.39■□□□□ 0.54
LMNAP02545 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.39■□□□□ 0.53
LMNAP02545 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.39■□□□□ 0.53
LMNAP02545 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.39■□□□□ 0.53
LMNAP02545 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.39■□□□□ 0.53
LMNAP02545 FGFR3P6-201ENST00000457012 610 ntBASIC18.39■□□□□ 0.53
LMNAP02545 CYMP-203ENST00000474680 1263 ntBASIC18.39■□□□□ 0.53
LMNAP02545 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.39■□□□□ 0.53
LMNAP02545 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.39■□□□□ 0.53
LMNAP02545 AC034105.1-201ENST00000563488 319 ntBASIC18.39■□□□□ 0.53
LMNAP02545 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.39■□□□□ 0.53
LMNAP02545 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.39■□□□□ 0.53
LMNAP02545 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LMNAP02545 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.39■□□□□ 0.53
LMNAP02545 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMNAP02545 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 AC134043.2-201ENST00000624206 2238 ntBASIC18.38■□□□□ 0.53
LMNAP02545 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.38■□□□□ 0.53
LMNAP02545 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.38■□□□□ 0.53
LMNAP02545 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.38■□□□□ 0.53
LMNAP02545 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LMNAP02545 RBM17P3-201ENST00000417687 1192 ntBASIC18.38■□□□□ 0.53
LMNAP02545 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.38■□□□□ 0.53
LMNAP02545 FAM8A3P-201ENST00000427218 844 ntBASIC18.38■□□□□ 0.53
LMNAP02545 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.38■□□□□ 0.53
LMNAP02545 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.38■□□□□ 0.53
LMNAP02545 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.38■□□□□ 0.53
LMNAP02545 AC024563.2-201ENST00000603282 481 ntBASIC18.38■□□□□ 0.53
LMNAP02545 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.38■□□□□ 0.53
LMNAP02545 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LMNAP02545 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.38■□□□□ 0.53
LMNAP02545 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LMNAP02545 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.38■□□□□ 0.53
LMNAP02545 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.38■□□□□ 0.53
LMNAP02545 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.38■□□□□ 0.53
LMNAP02545 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.38■□□□□ 0.53
LMNAP02545 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMNAP02545 PCDHA12-202ENST00000613593 2588 ntBASIC18.37■□□□□ 0.53
LMNAP02545 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.37■□□□□ 0.53
LMNAP02545 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.37■□□□□ 0.53
LMNAP02545 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 AC012317.2-201ENST00000623305 2251 ntBASIC18.37■□□□□ 0.53
LMNAP02545 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LMNAP02545 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.37■□□□□ 0.53
LMNAP02545 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LMNAP02545 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LMNAP02545 METTL21AP1-201ENST00000438852 635 ntBASIC18.37■□□□□ 0.53
LMNAP02545 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.37■□□□□ 0.53
LMNAP02545 MTDHP3-201ENST00000594186 672 ntBASIC18.37■□□□□ 0.53
LMNAP02545 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LMNAP02545 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.37■□□□□ 0.53
LMNAP02545 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LMNAP02545 AL353692.3-201ENST00000407031 1396 ntBASIC18.37■□□□□ 0.53
LMNAP02545 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.37■□□□□ 0.53
LMNAP02545 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms