Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ABCA1O95477 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ABCA1O95477 ANO7L1-203ENST00000602586 1720 ntBASIC14.74□□□□□ -0.05
ABCA1O95477 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCA1O95477 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 AC079776.2-201ENST00000641154 1609 ntBASIC14.74□□□□□ -0.05
ABCA1O95477 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCA1O95477 AC136632.2-201ENST00000512891 861 ntBASIC14.74□□□□□ -0.05
ABCA1O95477 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ABCA1O95477 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.74□□□□□ -0.05
ABCA1O95477 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCA1O95477 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.74□□□□□ -0.05
ABCA1O95477 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ABCA1O95477 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ABCA1O95477 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ABCA1O95477 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCA1O95477 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 KRT18P65-201ENST00000439811 1286 ntBASIC14.73□□□□□ -0.05
ABCA1O95477 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCA1O95477 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.73□□□□□ -0.05
ABCA1O95477 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.73□□□□□ -0.05
ABCA1O95477 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCA1O95477 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 SIGLEC16-201ENST00000599858 1437 ntBASIC14.73□□□□□ -0.05
ABCA1O95477 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ABCA1O95477 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCA1O95477 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.73□□□□□ -0.05
ABCA1O95477 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ABCA1O95477 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.73□□□□□ -0.05
ABCA1O95477 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.73□□□□□ -0.05
ABCA1O95477 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.73□□□□□ -0.05
ABCA1O95477 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 AC006557.2-201ENST00000592985 1240 ntBASIC14.73□□□□□ -0.05
ABCA1O95477 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.73□□□□□ -0.05
ABCA1O95477 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
ABCA1O95477 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.73□□□□□ -0.05
ABCA1O95477 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.73□□□□□ -0.05
ABCA1O95477 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ABCA1O95477 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA1O95477 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ABCA1O95477 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCA1O95477 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ABCA1O95477 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ABCA1O95477 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.72□□□□□ -0.05
ABCA1O95477 AC254562.1-201ENST00000417586 456 ntBASIC14.72□□□□□ -0.05
ABCA1O95477 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.72□□□□□ -0.05
ABCA1O95477 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ABCA1O95477 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.72□□□□□ -0.05
ABCA1O95477 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.72□□□□□ -0.05
ABCA1O95477 AP002414.3-201ENST00000589352 1468 ntBASIC14.72□□□□□ -0.05
ABCA1O95477 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ABCA1O95477 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.72□□□□□ -0.05
ABCA1O95477 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms