Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.27■□□□□ 0.04
CCNKO75909 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.27■□□□□ 0.04
CCNKO75909 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCNKO75909 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.27■□□□□ 0.04
CCNKO75909 BID-214ENST00000617586 542 ntTSL 5 BASIC15.27■□□□□ 0.04
CCNKO75909 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.27■□□□□ 0.04
CCNKO75909 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCNKO75909 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.27■□□□□ 0.03
CCNKO75909 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.27■□□□□ 0.03
CCNKO75909 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.27■□□□□ 0.03
CCNKO75909 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.27■□□□□ 0.03
CCNKO75909 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCNKO75909 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CCNKO75909 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCNKO75909 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCNKO75909 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCNKO75909 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.27■□□□□ 0.03
CCNKO75909 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCNKO75909 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.27■□□□□ 0.03
CCNKO75909 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCNKO75909 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCNKO75909 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.27■□□□□ 0.03
CCNKO75909 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCNKO75909 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CCNKO75909 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.26■□□□□ 0.03
CCNKO75909 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNKO75909 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCNKO75909 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.26■□□□□ 0.03
CCNKO75909 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNKO75909 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCNKO75909 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCNKO75909 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.26■□□□□ 0.03
CCNKO75909 AC093787.1-201ENST00000450396 207 ntBASIC15.26■□□□□ 0.03
CCNKO75909 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNKO75909 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNKO75909 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCNKO75909 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.26■□□□□ 0.03
CCNKO75909 AC008694.1-202ENST00000636953 945 ntBASIC15.26■□□□□ 0.03
CCNKO75909 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCNKO75909 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNKO75909 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNKO75909 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNKO75909 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNKO75909 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCNKO75909 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.25■□□□□ 0.03
CCNKO75909 TSPY23P-201ENST00000440136 739 ntBASIC15.25■□□□□ 0.03
CCNKO75909 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCNKO75909 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.25■□□□□ 0.03
CCNKO75909 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCNKO75909 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCNKO75909 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 KRT8P32-201ENST00000512863 1461 ntBASIC15.25■□□□□ 0.03
CCNKO75909 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCNKO75909 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.25■□□□□ 0.03
CCNKO75909 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
CCNKO75909 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCNKO75909 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms