Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.52■□□□□ 0.4
PHGDHO43175 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PHGDHO43175 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PHGDHO43175 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 AC011676.5-201ENST00000624864 2660 ntBASIC17.52■□□□□ 0.4
PHGDHO43175 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PHGDHO43175 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.52■□□□□ 0.4
PHGDHO43175 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 RNF152P1-201ENST00000397754 604 ntBASIC17.52■□□□□ 0.4
PHGDHO43175 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
PHGDHO43175 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.52■□□□□ 0.4
PHGDHO43175 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.52■□□□□ 0.4
PHGDHO43175 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.52■□□□□ 0.4
PHGDHO43175 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.52■□□□□ 0.4
PHGDHO43175 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.52■□□□□ 0.4
PHGDHO43175 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 AC005332.3-201ENST00000589904 676 ntBASIC17.52■□□□□ 0.4
PHGDHO43175 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.52■□□□□ 0.4
PHGDHO43175 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHGDHO43175 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHGDHO43175 NKILA-202ENST00000614771 2598 ntBASIC17.52■□□□□ 0.39
PHGDHO43175 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHGDHO43175 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHGDHO43175 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PHGDHO43175 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PHGDHO43175 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
PHGDHO43175 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PHGDHO43175 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHGDHO43175 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHGDHO43175 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PHGDHO43175 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHGDHO43175 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PHGDHO43175 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.51■□□□□ 0.39
PHGDHO43175 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.51■□□□□ 0.39
PHGDHO43175 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.51■□□□□ 0.39
PHGDHO43175 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.51■□□□□ 0.39
PHGDHO43175 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.51■□□□□ 0.39
PHGDHO43175 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.51■□□□□ 0.39
PHGDHO43175 AK4P3-201ENST00000418260 669 ntBASIC17.51■□□□□ 0.39
PHGDHO43175 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 RNF126P1-202ENST00000569893 925 ntBASIC17.51■□□□□ 0.39
PHGDHO43175 HYMAI.1-201ENST00000620949 238 ntBASIC17.51■□□□□ 0.39
PHGDHO43175 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.51■□□□□ 0.39
PHGDHO43175 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.51■□□□□ 0.39
PHGDHO43175 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
PHGDHO43175 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHGDHO43175 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PHGDHO43175 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.5■□□□□ 0.39
PHGDHO43175 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.5■□□□□ 0.39
PHGDHO43175 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.5■□□□□ 0.39
PHGDHO43175 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PHGDHO43175 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.5■□□□□ 0.39
PHGDHO43175 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PHGDHO43175 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.5■□□□□ 0.39
PHGDHO43175 HOMER2P1-201ENST00000455653 964 ntBASIC17.5■□□□□ 0.39
PHGDHO43175 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.5■□□□□ 0.39
PHGDHO43175 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.5■□□□□ 0.39
PHGDHO43175 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.5■□□□□ 0.39
PHGDHO43175 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.5■□□□□ 0.39
PHGDHO43175 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
PHGDHO43175 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 AL390719.2-201ENST00000606993 987 ntBASIC17.5■□□□□ 0.39
PHGDHO43175 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHGDHO43175 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms