Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GSC2O15499 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GSC2O15499 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.95■□□□□ 0.3
GSC2O15499 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GSC2O15499 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.94■□□□□ 0.3
GSC2O15499 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GSC2O15499 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
GSC2O15499 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.94■□□□□ 0.3
GSC2O15499 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.94■□□□□ 0.3
GSC2O15499 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.94■□□□□ 0.3
GSC2O15499 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GSC2O15499 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.94■□□□□ 0.3
GSC2O15499 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.94■□□□□ 0.3
GSC2O15499 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.94■□□□□ 0.3
GSC2O15499 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.94■□□□□ 0.3
GSC2O15499 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.94■□□□□ 0.3
GSC2O15499 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
GSC2O15499 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GSC2O15499 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 AC005052.1-201ENST00000625181 2492 ntBASIC16.94■□□□□ 0.3
GSC2O15499 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
GSC2O15499 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
GSC2O15499 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GSC2O15499 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.93■□□□□ 0.3
GSC2O15499 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GSC2O15499 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.93■□□□□ 0.3
GSC2O15499 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.93■□□□□ 0.3
GSC2O15499 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GSC2O15499 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.93■□□□□ 0.3
GSC2O15499 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.93■□□□□ 0.3
GSC2O15499 AC011506.1-201ENST00000474329 610 ntBASIC16.93■□□□□ 0.3
GSC2O15499 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.93■□□□□ 0.3
GSC2O15499 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
GSC2O15499 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.93■□□□□ 0.3
GSC2O15499 AL353708.3-201ENST00000610272 989 ntBASIC16.93■□□□□ 0.3
GSC2O15499 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GSC2O15499 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
GSC2O15499 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.93■□□□□ 0.3
GSC2O15499 LINC01311-201ENST00000565162 1445 ntBASIC16.93■□□□□ 0.3
GSC2O15499 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GSC2O15499 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.93■□□□□ 0.3
GSC2O15499 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
GSC2O15499 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.93■□□□□ 0.3
GSC2O15499 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GSC2O15499 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GSC2O15499 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.92■□□□□ 0.3
GSC2O15499 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.92■□□□□ 0.3
GSC2O15499 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.92■□□□□ 0.3
GSC2O15499 AC026271.3-201ENST00000571884 352 ntBASIC16.92■□□□□ 0.3
GSC2O15499 LINC00167-201ENST00000530583 1419 ntBASIC16.92■□□□□ 0.3
GSC2O15499 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.92■□□□□ 0.3
GSC2O15499 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.92■□□□□ 0.3
GSC2O15499 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GSC2O15499 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms