Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.6■□□□□ 0.57
CAPN9O14815 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.6■□□□□ 0.57
CAPN9O14815 AC138894.3-201ENST00000603787 634 ntBASIC18.6■□□□□ 0.57
CAPN9O14815 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN9O14815 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN9O14815 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN9O14815 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN9O14815 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CAPN9O14815 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN9O14815 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN9O14815 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CAPN9O14815 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN9O14815 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN9O14815 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN9O14815 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN9O14815 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN9O14815 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CAPN9O14815 AC012317.2-201ENST00000623305 2251 ntBASIC18.6■□□□□ 0.57
CAPN9O14815 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CAPN9O14815 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPN9O14815 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CAPN9O14815 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CAPN9O14815 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.59■□□□□ 0.57
CAPN9O14815 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.59■□□□□ 0.57
CAPN9O14815 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPN9O14815 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 DDX43P3-201ENST00000441064 443 ntBASIC18.59■□□□□ 0.57
CAPN9O14815 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.59■□□□□ 0.57
CAPN9O14815 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.59■□□□□ 0.57
CAPN9O14815 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.59■□□□□ 0.57
CAPN9O14815 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CAPN9O14815 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CAPN9O14815 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 AC008764.6-201ENST00000595909 2069 ntBASIC18.59■□□□□ 0.57
CAPN9O14815 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CAPN9O14815 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN9O14815 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN9O14815 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN9O14815 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.58■□□□□ 0.57
CAPN9O14815 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN9O14815 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN9O14815 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
CAPN9O14815 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN9O14815 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.58■□□□□ 0.57
CAPN9O14815 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.58■□□□□ 0.57
CAPN9O14815 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN9O14815 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN9O14815 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.58■□□□□ 0.57
CAPN9O14815 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.58■□□□□ 0.57
CAPN9O14815 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN9O14815 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN9O14815 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN9O14815 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN9O14815 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
CAPN9O14815 POM121L3P-201ENST00000419331 1163 ntBASIC18.58■□□□□ 0.56
CAPN9O14815 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CAPN9O14815 NUS1P1-201ENST00000446295 882 ntBASIC18.58■□□□□ 0.56
CAPN9O14815 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.58■□□□□ 0.56
CAPN9O14815 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN9O14815 FOSL1P1-201ENST00000511041 816 ntBASIC18.58■□□□□ 0.56
CAPN9O14815 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.58■□□□□ 0.56
CAPN9O14815 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.58■□□□□ 0.56
CAPN9O14815 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.58■□□□□ 0.56
CAPN9O14815 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.58■□□□□ 0.56
CAPN9O14815 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN9O14815 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN9O14815 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CAPN9O14815 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN9O14815 TP73-AS1-210ENST00000637775 1455 ntBASIC18.58■□□□□ 0.56
CAPN9O14815 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN9O14815 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN9O14815 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CAPN9O14815 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN9O14815 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN9O14815 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN9O14815 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CAPN9O14815 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN9O14815 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN9O14815 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN9O14815 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CAPN9O14815 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN9O14815 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN9O14815 NUS1P2-201ENST00000417358 873 ntBASIC18.57■□□□□ 0.56
CAPN9O14815 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN9O14815 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.57■□□□□ 0.56
CAPN9O14815 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.57■□□□□ 0.56
CAPN9O14815 AC007967.3-201ENST00000434308 558 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms