Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 VENTXP7-201ENST00000475503 772 ntBASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 AC091076.1-201ENST00000610741 619 ntBASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC162PA2VCL2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 AC099398.1-201ENST00000567919 2776 ntBASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 TOB2P1-201ENST00000469761 992 ntBASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 MIR3180-1-201ENST00000580374 94 ntBASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 MIR3180-3-201ENST00000584616 94 ntBASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 AC069148.1-201ENST00000608741 768 ntBASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 SIRPAP1-201ENST00000448467 1770 ntBASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 CROCCP2-202ENST00000412962 2773 ntBASIC17.6■□□□□ 0.41
CCDC162PA2VCL2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 AC108860.2-201ENST00000562760 2183 ntBASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 LINC00265-3P-201ENST00000447588 903 ntBASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 NPAP1P7-201ENST00000613027 823 ntBASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC162PA2VCL2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CCDC162PA2VCL2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC162PA2VCL2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC162PA2VCL2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC162PA2VCL2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC162PA2VCL2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC162PA2VCL2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC162PA2VCL2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms