Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
IGKV3D-20A0A0C4DH25 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 DDX43P3-201ENST00000441064 443 ntBASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 GCSHP5-201ENST00000443090 522 ntBASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MIR3917-201ENST00000580971 93 ntBASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 Z99916.2-201ENST00000604037 246 ntBASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 C2orf69P3-201ENST00000565542 1120 ntBASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AGGF1P2-201ENST00000426656 2106 ntBASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms