Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 MED15P5-201ENST00000423150 992 ntBASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 AL591424.1-201ENST00000442569 1213 ntBASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 AC073621.1-201ENST00000392730 636 ntBASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 AC005104.2-201ENST00000427818 678 ntBASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 AC140113.2-201ENST00000604370 208 ntBASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 FAM197Y3-203ENST00000618346 717 ntBASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV5A0A0B4J1U4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRGV5A0A0B4J1U4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms