Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 GPAT2P1-201ENST00000444924 1672 ntBASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 BX664615.1-201ENST00000443558 458 ntBASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
AP4B1Q9Y6B7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 TMPOP1-202ENST00000424642 1267 ntBASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 KRT18P57-201ENST00000443599 1254 ntBASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 WWOX-216ENST00000569818 525 ntBASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 MIR4674-201ENST00000582457 87 ntBASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4B1Q9Y6B7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 AP000523.1-201ENST00000398242 1049 ntBASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 RN7SL850P-201ENST00000579959 291 ntBASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 MIR3180-5-201ENST00000583743 153 ntBASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 AC141257.4-201ENST00000634557 245 ntBASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 AC136944.6-201ENST00000634818 245 ntBASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 AL109659.2-201ENST00000606809 1674 ntBASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.93■□□□□ 0.3
AP4B1Q9Y6B7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms