Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 AC023141.13-201ENST00000604991 943 ntBASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 AL096865.1-201ENST00000606796 927 ntBASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 AC005082.1-201ENST00000413042 2259 ntBASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA1Q9Y5H4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 AL035633.1-201ENST00000406139 838 ntBASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 AC093028.1-201ENST00000622998 982 ntBASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 AL513210.1-201ENST00000629608 234 ntBASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA1Q9Y5H4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 PTCHD3P3-201ENST00000403073 906 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms