Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP22Q9UPT9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP22Q9UPT9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP22Q9UPT9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP22Q9UPT9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP22Q9UPT9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP22Q9UPT9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
USP22Q9UPT9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.64■□□□□ 0.25
USP22Q9UPT9 RNF216P1-203ENST00000404404 2427 ntBASIC16.64■□□□□ 0.25
USP22Q9UPT9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 AC092171.3-201ENST00000610122 2651 ntBASIC16.63■□□□□ 0.25
USP22Q9UPT9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.63■□□□□ 0.25
USP22Q9UPT9 ECEL1P2-202ENST00000465689 757 ntBASIC16.63■□□□□ 0.25
USP22Q9UPT9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 EGLN1P1-201ENST00000531623 762 ntBASIC16.63■□□□□ 0.25
USP22Q9UPT9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 FAM87A-204ENST00000613235 858 ntBASIC16.63■□□□□ 0.25
USP22Q9UPT9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.63■□□□□ 0.25
USP22Q9UPT9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP22Q9UPT9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 AC092053.1-201ENST00000605787 1936 ntBASIC16.62■□□□□ 0.25
USP22Q9UPT9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 KRT18P65-201ENST00000439811 1286 ntBASIC16.62■□□□□ 0.25
USP22Q9UPT9 AC113404.2-201ENST00000507884 177 ntBASIC16.62■□□□□ 0.25
USP22Q9UPT9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
USP22Q9UPT9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP22Q9UPT9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP22Q9UPT9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.61■□□□□ 0.25
USP22Q9UPT9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP22Q9UPT9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
USP22Q9UPT9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP22Q9UPT9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP22Q9UPT9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP22Q9UPT9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.61■□□□□ 0.25
USP22Q9UPT9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
USP22Q9UPT9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP22Q9UPT9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP22Q9UPT9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.61■□□□□ 0.25
USP22Q9UPT9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
USP22Q9UPT9 LINC02199-201ENST00000506655 2702 ntBASIC16.61■□□□□ 0.25
USP22Q9UPT9 OR6D1P-202ENST00000641007 5290 ntBASIC16.61■□□□□ 0.25
USP22Q9UPT9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP22Q9UPT9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms