Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 IGHV3-52-201ENST00000519770 353 ntBASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 IGHV3-22-201ENST00000520721 359 ntBASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 AC105339.3-201ENST00000560043 636 ntBASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 AC148477.5-201ENST00000625164 1645 ntBASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCF1Q9UBD9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 AC005104.2-201ENST00000427818 678 ntBASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 PMS2P1-201ENST00000431037 1228 ntBASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 AC098831.1-202ENST00000438821 336 ntBASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 AC092910.1-201ENST00000482027 1129 ntBASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
CLCF1Q9UBD9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms