Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 AL357033.4-201ENST00000617703 1807 ntBASIC16.06■□□□□ 0.16
HMG20AQ9NP66 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 C1QBPP2-201ENST00000528754 825 ntBASIC16.06■□□□□ 0.16
HMG20AQ9NP66 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 MIR4651-201ENST00000582622 73 ntBASIC16.06■□□□□ 0.16
HMG20AQ9NP66 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 AL136379.1-201ENST00000623471 2642 ntBASIC16.06■□□□□ 0.16
HMG20AQ9NP66 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.06■□□□□ 0.16
HMG20AQ9NP66 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 HTR7P1-201ENST00000538670 1336 ntBASIC16.05■□□□□ 0.16
HMG20AQ9NP66 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 AP002982.1-201ENST00000492365 877 ntBASIC16.05■□□□□ 0.16
HMG20AQ9NP66 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 AC023824.1-201ENST00000562945 2975 ntBASIC16.05■□□□□ 0.16
HMG20AQ9NP66 AL353708.3-201ENST00000610272 989 ntBASIC16.05■□□□□ 0.16
HMG20AQ9NP66 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 AC132872.4-202ENST00000622924 2756 ntBASIC16.05■□□□□ 0.16
HMG20AQ9NP66 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMG20AQ9NP66 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 AC105917.1-201ENST00000506637 2539 ntBASIC16.04■□□□□ 0.16
HMG20AQ9NP66 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 AC004980.1-204ENST00000429707 299 ntBASIC16.04■□□□□ 0.16
HMG20AQ9NP66 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.04■□□□□ 0.16
HMG20AQ9NP66 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms