Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
KCNF1Q9H3M0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNF1Q9H3M0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 AC142086.2-201ENST00000569753 217 ntBASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 WWOX-216ENST00000569818 525 ntBASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 AF186192.3-201ENST00000583427 947 ntBASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 AC010240.3-201ENST00000607688 395 ntBASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 AC093525.9-201ENST00000624961 1746 ntBASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNF1Q9H3M0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 AL353807.1-201ENST00000427475 662 ntBASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 SLC25A1P4-201ENST00000567977 778 ntBASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 AC112497.1-201ENST00000624824 639 ntBASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 AL365203.3-201ENST00000609742 2057 ntBASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNF1Q9H3M0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNF1Q9H3M0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNF1Q9H3M0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNF1Q9H3M0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNF1Q9H3M0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNF1Q9H3M0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms