Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 NORAD-201ENST00000565493 5339 ntBASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 AC232323.1-201ENST00000540724 2099 ntBASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 REXO1L5P-201ENST00000622260 2098 ntBASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 MTMR9LP-203ENST00000426597 1545 ntBASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC10.15□□□□□ -0.78
CYSTM1Q9H1C7 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
CYSTM1Q9H1C7 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
CYSTM1Q9H1C7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CYSTM1Q9H1C7 HEIH-201ENST00000623091 1652 ntBASIC10.15□□□□□ -0.79
CYSTM1Q9H1C7 CICP16-201ENST00000502609 2813 ntBASIC10.15□□□□□ -0.79
CYSTM1Q9H1C7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CYSTM1Q9H1C7 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC10.15□□□□□ -0.79
CYSTM1Q9H1C7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC10.15□□□□□ -0.79
CYSTM1Q9H1C7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC10.15□□□□□ -0.79
CYSTM1Q9H1C7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC10.15□□□□□ -0.79
CYSTM1Q9H1C7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 TCAF1P1-201ENST00000414990 2232 ntBASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 AL118506.1-201ENST00000601296 3082 ntBASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms