Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXB1Q99853 AC103564.2-201ENST00000432853 1299 ntBASIC15.51■□□□□ 0.07
FOXB1Q99853 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FOXB1Q99853 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.51■□□□□ 0.07
FOXB1Q99853 AC002558.1-201ENST00000488906 803 ntBASIC15.51■□□□□ 0.07
FOXB1Q99853 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
FOXB1Q99853 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXB1Q99853 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXB1Q99853 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
FOXB1Q99853 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXB1Q99853 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXB1Q99853 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXB1Q99853 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXB1Q99853 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXB1Q99853 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXB1Q99853 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
FOXB1Q99853 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
FOXB1Q99853 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
FOXB1Q99853 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
FOXB1Q99853 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXB1Q99853 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXB1Q99853 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 RCN1P2-201ENST00000398357 915 ntBASIC15.5■□□□□ 0.07
FOXB1Q99853 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 NUS1P2-201ENST00000417358 873 ntBASIC15.5■□□□□ 0.07
FOXB1Q99853 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXB1Q99853 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXB1Q99853 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.5■□□□□ 0.07
FOXB1Q99853 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXB1Q99853 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXB1Q99853 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.5■□□□□ 0.07
FOXB1Q99853 AC138894.3-201ENST00000603787 634 ntBASIC15.5■□□□□ 0.07
FOXB1Q99853 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXB1Q99853 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXB1Q99853 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXB1Q99853 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
FOXB1Q99853 INTS4P1-201ENST00000438455 1935 ntBASIC15.5■□□□□ 0.07
FOXB1Q99853 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXB1Q99853 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXB1Q99853 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXB1Q99853 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXB1Q99853 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXB1Q99853 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
FOXB1Q99853 SIRPAP1-201ENST00000448467 1770 ntBASIC15.49■□□□□ 0.07
FOXB1Q99853 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXB1Q99853 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXB1Q99853 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
FOXB1Q99853 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXB1Q99853 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FOXB1Q99853 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXB1Q99853 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FOXB1Q99853 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
FOXB1Q99853 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXB1Q99853 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXB1Q99853 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FOXB1Q99853 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXB1Q99853 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXB1Q99853 NUS1P1-201ENST00000446295 882 ntBASIC15.49■□□□□ 0.07
FOXB1Q99853 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.49■□□□□ 0.07
FOXB1Q99853 IGHV3-52-201ENST00000519770 353 ntBASIC15.49■□□□□ 0.07
FOXB1Q99853 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXB1Q99853 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.49■□□□□ 0.07
FOXB1Q99853 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXB1Q99853 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FOXB1Q99853 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXB1Q99853 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXB1Q99853 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXB1Q99853 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FOXB1Q99853 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXB1Q99853 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms