Protein–RNA interactions for Protein: Q96MU7

YTHDC1, YTH domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDC1Q96MU7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 NCF1B-203ENST00000435988 1254 ntBASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 AC036111.1-201ENST00000533973 1582 ntBASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC24.4■■□□□ 1.5
YTHDC1Q96MU7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
YTHDC1Q96MU7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC24.39■■□□□ 1.5
YTHDC1Q96MU7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
YTHDC1Q96MU7 AP002414.2-201ENST00000591780 3365 ntBASIC24.39■■□□□ 1.5
YTHDC1Q96MU7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
YTHDC1Q96MU7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
YTHDC1Q96MU7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
YTHDC1Q96MU7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 UNC93B5-201ENST00000530315 699 ntBASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 AL137784.2-201ENST00000607332 1000 ntBASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
YTHDC1Q96MU7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 AC011506.1-201ENST00000474329 610 ntBASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 MIR5787-201ENST00000611784 55 ntBASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 AC009949.1-201ENST00000623048 1830 ntBASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
YTHDC1Q96MU7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
YTHDC1Q96MU7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC24.36■■□□□ 1.49
YTHDC1Q96MU7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC24.36■■□□□ 1.49
YTHDC1Q96MU7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms