Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM47Q96LD4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 MCCD1P2-201ENST00000423228 335 ntBASIC20.58■□□□□ 0.89
TRIM47Q96LD4 KRT18P2-201ENST00000447938 1258 ntBASIC20.58■□□□□ 0.89
TRIM47Q96LD4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 YBX1P5-201ENST00000509441 847 ntBASIC20.58■□□□□ 0.89
TRIM47Q96LD4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 AC005829.1-201ENST00000570002 483 ntBASIC20.58■□□□□ 0.89
TRIM47Q96LD4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM47Q96LD4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
TRIM47Q96LD4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM47Q96LD4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM47Q96LD4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM47Q96LD4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.58■□□□□ 0.88
TRIM47Q96LD4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
TRIM47Q96LD4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.58■□□□□ 0.88
TRIM47Q96LD4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM47Q96LD4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM47Q96LD4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
TRIM47Q96LD4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 HTR5BP-201ENST00000430851 1154 ntBASIC20.57■□□□□ 0.88
TRIM47Q96LD4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 NOC2LP1-202ENST00000452600 2235 ntBASIC20.57■□□□□ 0.88
TRIM47Q96LD4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM47Q96LD4 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 KRT18P27-201ENST00000427733 1299 ntBASIC20.56■□□□□ 0.88
TRIM47Q96LD4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 BX005266.1-201ENST00000473402 457 ntBASIC20.56■□□□□ 0.88
TRIM47Q96LD4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 SNHG9-202ENST00000564014 471 ntBASIC20.56■□□□□ 0.88
TRIM47Q96LD4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM47Q96LD4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms