Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 AC011498.5-201ENST00000592027 486 ntBASIC18.63■□□□□ 0.57
TRIM11Q96F44 AL353801.3-201ENST00000609898 542 ntBASIC18.63■□□□□ 0.57
TRIM11Q96F44 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 FZD10-202ENST00000539839 3282 ntBASIC18.63■□□□□ 0.57
TRIM11Q96F44 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM11Q96F44 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRIM11Q96F44 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 AP001094.4-201ENST00000579008 2176 ntBASIC18.62■□□□□ 0.57
TRIM11Q96F44 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM11Q96F44 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
TRIM11Q96F44 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM11Q96F44 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM11Q96F44 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM11Q96F44 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM11Q96F44 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM11Q96F44 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM11Q96F44 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM11Q96F44 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM11Q96F44 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 AC007967.3-201ENST00000434308 558 ntBASIC18.61■□□□□ 0.57
TRIM11Q96F44 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 IGHV3-52-201ENST00000519770 353 ntBASIC18.61■□□□□ 0.57
TRIM11Q96F44 KRT8P26-201ENST00000534154 1276 ntBASIC18.61■□□□□ 0.57
TRIM11Q96F44 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 AC124864.1-201ENST00000623408 392 ntBASIC18.61■□□□□ 0.57
TRIM11Q96F44 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.61■□□□□ 0.57
TRIM11Q96F44 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
TRIM11Q96F44 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM11Q96F44 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 AC125634.1-201ENST00000438758 1403 ntBASIC18.6■□□□□ 0.57
TRIM11Q96F44 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms