Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 KRT89P-201ENST00000620027 1478 ntBASIC13.92□□□□□ -0.18
NPIPB3Q92617 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NPIPB3Q92617 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB3Q92617 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 AC140113.3-201ENST00000605663 199 ntBASIC13.91□□□□□ -0.18
NPIPB3Q92617 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB3Q92617 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB3Q92617 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms