Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.24■□□□□ 0.99
SNED1Q8TER0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNED1Q8TER0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
SNED1Q8TER0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNED1Q8TER0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNED1Q8TER0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.24■□□□□ 0.99
SNED1Q8TER0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNED1Q8TER0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SNED1Q8TER0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNED1Q8TER0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNED1Q8TER0 FAM86GP-201ENST00000448322 971 ntBASIC21.23■□□□□ 0.99
SNED1Q8TER0 AC112191.1-201ENST00000523689 701 ntBASIC21.23■□□□□ 0.99
SNED1Q8TER0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.23■□□□□ 0.99
SNED1Q8TER0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNED1Q8TER0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SNED1Q8TER0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNED1Q8TER0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNED1Q8TER0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNED1Q8TER0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SNED1Q8TER0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.23■□□□□ 0.99
SNED1Q8TER0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.23■□□□□ 0.99
SNED1Q8TER0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
SNED1Q8TER0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.22■□□□□ 0.99
SNED1Q8TER0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 IGHV3-52-201ENST00000519770 353 ntBASIC21.22■□□□□ 0.99
SNED1Q8TER0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.22■□□□□ 0.99
SNED1Q8TER0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.22■□□□□ 0.99
SNED1Q8TER0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.22■□□□□ 0.99
SNED1Q8TER0 AC087289.5-201ENST00000586076 3175 ntBASIC21.22■□□□□ 0.99
SNED1Q8TER0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.22■□□□□ 0.99
SNED1Q8TER0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.22■□□□□ 0.99
SNED1Q8TER0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
SNED1Q8TER0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.22■□□□□ 0.99
SNED1Q8TER0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNED1Q8TER0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 AC087163.2-201ENST00000457299 853 ntBASIC21.21■□□□□ 0.99
SNED1Q8TER0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 AC107918.2-201ENST00000530817 355 ntBASIC21.21■□□□□ 0.99
SNED1Q8TER0 DUX4L27-201ENST00000554796 1261 ntBASIC21.21■□□□□ 0.99
SNED1Q8TER0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNED1Q8TER0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.21■□□□□ 0.99
SNED1Q8TER0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SNED1Q8TER0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 AC140658.5-201ENST00000438532 169 ntBASIC21.2■□□□□ 0.98
SNED1Q8TER0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms