Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 RPS15P9-201ENST00000494093 319 ntBASIC27.36■■□□□ 1.97
VPS8Q8N3P4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
VPS8Q8N3P4 RPL13AP23-201ENST00000480739 586 ntBASIC27.35■■□□□ 1.97
VPS8Q8N3P4 AC008667.4-201ENST00000607370 168 ntBASIC27.35■■□□□ 1.97
VPS8Q8N3P4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
VPS8Q8N3P4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
VPS8Q8N3P4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
VPS8Q8N3P4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
VPS8Q8N3P4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
VPS8Q8N3P4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 MIR574-201ENST00000385209 96 ntBASIC27.34■■□□□ 1.97
VPS8Q8N3P4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 PMS2P1-201ENST00000431037 1228 ntBASIC27.34■■□□□ 1.97
VPS8Q8N3P4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 PGM5P2-202ENST00000637225 1043 ntBASIC27.34■■□□□ 1.97
VPS8Q8N3P4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
VPS8Q8N3P4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 AC108751.1-201ENST00000490852 363 ntBASIC27.33■■□□□ 1.97
VPS8Q8N3P4 IGHV3-65-201ENST00000523210 341 ntBASIC27.33■■□□□ 1.97
VPS8Q8N3P4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC27.33■■□□□ 1.97
VPS8Q8N3P4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
VPS8Q8N3P4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.96
VPS8Q8N3P4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
VPS8Q8N3P4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
VPS8Q8N3P4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
VPS8Q8N3P4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC27.33■■□□□ 1.96
VPS8Q8N3P4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC27.33■■□□□ 1.96
VPS8Q8N3P4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 AP002414.1-201ENST00000391405 1147 ntBASIC27.32■■□□□ 1.96
VPS8Q8N3P4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 TERC-201ENST00000602385 541 ntBASIC27.32■■□□□ 1.96
VPS8Q8N3P4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
VPS8Q8N3P4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC27.31■■□□□ 1.96
VPS8Q8N3P4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
VPS8Q8N3P4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC27.3■■□□□ 1.96
VPS8Q8N3P4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
VPS8Q8N3P4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC27.3■■□□□ 1.96
VPS8Q8N3P4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
VPS8Q8N3P4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC27.3■■□□□ 1.96
VPS8Q8N3P4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms