Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 AC005915.1-201ENST00000624912 2018 ntBASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 PRORSD1P-201ENST00000295112 541 ntBASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 FAM201B-201ENST00000458407 597 ntBASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 AC092865.7-201ENST00000641832 219 ntBASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 CICP6-201ENST00000457191 2729 ntBASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 LINC01311-201ENST00000565162 1445 ntBASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM1Q86UE6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 INGX-201ENST00000359239 846 ntBASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 AC046185.3-201ENST00000623228 1824 ntBASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 AL157888.1-201ENST00000631930 593 ntBASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM1Q86UE6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM1Q86UE6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms