Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DENND1BQ6P3S1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DENND1BQ6P3S1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DENND1BQ6P3S1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.63■□□□□ 0.57
DENND1BQ6P3S1 AL138688.1-201ENST00000624851 1594 ntBASIC18.63■□□□□ 0.57
DENND1BQ6P3S1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.63■□□□□ 0.57
DENND1BQ6P3S1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DENND1BQ6P3S1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 AC012313.10-201ENST00000623509 926 ntBASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DENND1BQ6P3S1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 AL139327.4-201ENST00000612362 153 ntBASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DENND1BQ6P3S1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 AC103564.2-201ENST00000432853 1299 ntBASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DENND1BQ6P3S1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms