Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
CCL20P78556 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
CCL20P78556 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.9□□□□□ -0.19
CCL20P78556 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.89□□□□□ -0.19
CCL20P78556 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL20P78556 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CCL20P78556 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCL20P78556 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CCL20P78556 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 MIPEPP3-201ENST00000412105 444 ntBASIC13.89□□□□□ -0.19
CCL20P78556 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.89□□□□□ -0.19
CCL20P78556 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL20P78556 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.89□□□□□ -0.19
CCL20P78556 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL20P78556 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 CKBP1-201ENST00000565489 1086 ntBASIC13.89□□□□□ -0.19
CCL20P78556 SOX15-203ENST00000570788 1093 ntBASIC13.89□□□□□ -0.19
CCL20P78556 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.89□□□□□ -0.19
CCL20P78556 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.89□□□□□ -0.19
CCL20P78556 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL20P78556 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CCL20P78556 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL20P78556 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
CCL20P78556 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL20P78556 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL20P78556 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CCL20P78556 LINC02228-204ENST00000642115 2962 ntBASIC13.88□□□□□ -0.19
CCL20P78556 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCL20P78556 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CCL20P78556 MCCD1P1-208ENST00000445732 328 ntBASIC13.88□□□□□ -0.19
CCL20P78556 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL20P78556 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.88□□□□□ -0.19
CCL20P78556 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CCL20P78556 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL20P78556 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
CCL20P78556 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CCL20P78556 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL20P78556 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCL20P78556 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CCL20P78556 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL20P78556 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms